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CLE27 CLAVATA3/ESR-RELATED 27 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822187, updated on 18-Sep-2024

Summary

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Official Symbol
CLE27
Official Full Name
CLAVATA3/ESR-RELATED 27
Primary source
TAIR:AT3G25905
Locus tag
AT3G25905
See related
Araport:AT3G25905
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CLAVATA3/ESR-RELATED 27
Summary
Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
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Genomic context

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See CLE27 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (9486168..9486924, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Homocysteine S-methyltransferase family protein Neighboring gene MAP kinase kinase kinase, putative (DUF1644) Neighboring gene ncRNA Neighboring gene ribosomal protein L15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The signaling peptide-encoding genes CLE16, CLE17 and CLE27 are dispensable for Arabidopsis shoot apical meristem activity. Gregory EF, et al. PLoS One, 2018. PMID 30114285, Free PMC Article
  2. A large family of genes that share homology with CLAVATA3. Cock JM, et al. Plant Physiol, 2001 Jul. PMID 11457943, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_113494.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in cell-cell signaling involved in cell fate commitment ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in apoplast ISM
Inferred from Sequence Model
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
CLAVATA3/ESR-RELATED 27
NP_566783.1
  • CLAVATA3/ESR-RELATED 27 (CLE27); Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9486168..9486924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113494.2 → NP_566783.1  CLAVATA3/ESR-RELATED 27 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566783.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LC08, Q9LUA1
    UniProtKB/TrEMBL
    A0A178VKT8, A0A5S9XFR1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LUA1.1

Gene LinkOut

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