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Adenosylmethionine decarboxylase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822144, updated on 18-Sep-2024

Summary

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Official Full Name
Adenosylmethionine decarboxylase family protein
Primary source
TAIR:AT3G25570
Locus tag
AT3G25570
See related
Araport:AT3G25570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (9287178..9289338, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene NSP-interacting kinase 2 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Miscellaneous features

  • Loc: c9288615-9288595 AT3G25570.uORF1-1
  • Loc: c9288871-9288728 AT3G25570.uORF1-2
NM_001203043.1
NM_113454.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables adenosylmethionine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in spermine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Adenosylmethionine decarboxylase family protein
NP_001189972.1
  • Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4).
NP_189184.1
  • Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1034 Blast hits to 1011 proteins in 270 species: Archae - 0; Bacteria - 57; Metazoa - 222; Fungi - 155; Plants - 530; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9287178..9289338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203043.1 → NP_001189972.1  Adenosylmethionine decarboxylase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189972.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LSU6
    UniProtKB/TrEMBL
    A0A654FAS8, A0A7G2EQF7
    Conserved Domains (1) summary
    PLN02524
    Location:1 → 346
    PLN02524; S-adenosylmethionine decarboxylase

  2. NM_113454.3 → NP_189184.1  Adenosylmethionine decarboxylase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189184.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LSU6
    UniProtKB/TrEMBL
    A0A654FAS8, A0A7G2EQF7
    Conserved Domains (1) summary
    PLN02524
    Location:1 → 346
    PLN02524; S-adenosylmethionine decarboxylase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LSU6.1

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