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Cyclopropane-fatty-acyl-phospholipid synthase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821928, updated on 18-Sep-2024

Summary

Official Full Name
Cyclopropane-fatty-acyl-phospholipid synthase
Primary source
TAIR:AT3G23470
Locus tag
AT3G23470
See related
Araport:AT3G23470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 3
Exon count:
16
Sequence:
Chromosome: 3; NC_003074.8 (8414616..8418784)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Cyclopropane-fatty-acyl-phospholipid synthase Neighboring gene cyanase Neighboring gene ncRNA

General gene information

NM_113250.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within methylation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Cyclopropane-fatty-acyl-phospholipid synthase
NP_188989.2
  • Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23480.1); Has 719 Blast hits to 717 proteins in 247 species: Archae - 7; Bacteria - 630; Metazoa - 1; Fungi - 36; Plants - 32; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8414616..8418784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338640.1NP_001325982.1  Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LMW4, A0A654FA58
  2. NM_001338641.1NP_001325983.1  Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LMW4, A0A654FA58
  3. NM_113250.3NP_188989.2  Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188989.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V6S8, Q5PP30
    Conserved Domains (2) summary
    COG2230
    Location:152438
    Cfa; Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism]
    pfam12847
    Location:224325
    Methyltransf_18; Methyltransferase domain