U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

plant/protein (DUF668) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821892, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
plant/protein (DUF668)
Primary source
TAIR:AT3G23160
Locus tag
AT3G23160
See related
Araport:AT3G23160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (8259774..8262089, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein Neighboring gene Signal transduction histidine kinase, hybrid-type, ethylene sensor Neighboring gene low-molecular-weight cysteine-rich 42 Neighboring gene low-molecular-weight cysteine-rich 39

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_113217.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in positive regulation of growth IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
plant/protein (DUF668)
NP_188957.2
  • Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 431 Blast hits to 290 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 424; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8259774..8262089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113217.3 → NP_188957.2  plant/protein (DUF668) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188957.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VED2, A0A384L5C3, A0A654FB62, Q0WVR1, Q9LTD4
    Conserved Domains (2) summary
    pfam05003
    Location:360 → 448
    DUF668; Protein of unknown function (DUF668)
    pfam11961
    Location:45 → 101
    DUF3475; Domain of unknown function (DUF3475)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools