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cysteine-rich repeat secretory protein, putative (DUF26) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821756, updated on 18-Sep-2024

Summary

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Official Full Name
cysteine-rich repeat secretory protein, putative (DUF26)
Primary source
TAIR:AT3G21970
Locus tag
AT3G21970
See related
Araport:AT3G21970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (7742250..7743659)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Receptor-like protein kinase-related family protein Neighboring gene miscRNA Neighboring gene cysteine-rich repeat secretory protein, putative (DUF26) Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_113093.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cysteine-rich repeat secretory protein, putative (DUF26)
NP_188835.1
  • Domain of unknown function (DUF26); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF26) (TAIR:AT3G29040.1); Has 1282 Blast hits to 1258 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    7742250..7743659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113093.3 → NP_188835.1  cysteine-rich repeat secretory protein, putative (DUF26) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188835.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LRL1
    UniProtKB/TrEMBL
    A0A178V6R1, A0A5S9XEF6, A0A7G2EMI7
    Conserved Domains (1) summary
    pfam01657
    Location:39 → 138
    Stress-antifung; Salt stress response/antifungal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LRL1.2

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