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ABCI12 cobalt ion transmembrane transporter [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821712, updated on 18-Sep-2024

Summary

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Official Symbol
ABCI12
Official Full Name
cobalt ion transmembrane transporter
Primary source
TAIR:AT3G21580
Locus tag
AT3G21580
See related
Araport:AT3G21580
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATP-binding cassette I12
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Genomic context

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See ABCI12 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (7601822..7603899, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene proline-rich nuclear receptor coactivator Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene Senescence/dehydration-associated protein-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis. Voith von Voithenberg L, et al. Front Plant Sci, 2019. PMID 31736987, Free PMC Article
  2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_113053.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cobalt ion transmembrane transporter
NP_566688.4
  • cobalt ion transmembrane transporters; FUNCTIONS IN: cobalt ion transmembrane transporter activity; INVOLVED IN: cobalt ion transport, cobalamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalt transport protein (InterPro:IPR003339); Has 2014 Blast hits to 2014 proteins in 922 species: Archae - 36; Bacteria - 1790; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    7601822..7603899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113053.7 → NP_566688.4  cobalt ion transmembrane transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566688.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3EB30, Q944H2, Q9LVE8
    UniProtKB/TrEMBL
    A0A5S9XEQ7, A0A654F9E3
    Conserved Domains (1) summary
    COG0619
    Location:109 → 381
    EcfT; Energy-coupling factor transporter transmembrane protein EcfT [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q944H2.1

Gene LinkOut

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