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ETP1 EIN2 targeting protein1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821431, updated on 18-Sep-2024

Summary

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Official Symbol
ETP1
Official Full Name
EIN2 targeting protein1
Primary source
TAIR:AT3G18980
Locus tag
AT3G18980
See related
Araport:AT3G18980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
EIN2 targeting protein1
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Genomic context

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See ETP1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (6546200..6548092)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene mitochondrial editing factor 20 Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis. Qiao H, et al. Genes Dev, 2009 Feb 15. PMID 19196655, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001084716.2
NM_112784.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
EIN2 targeting protein1
NP_001078185.1
  • EIN2 targeting protein1 (ETP1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: EIN2 targeting protein2 (TAIR:AT3G18910.1); Has 1009 Blast hits to 963 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_566622.1
  • EIN2 targeting protein1 (ETP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: EIN2 targeting protein2 (TAIR:AT3G18910.1); Has 1009 Blast hits to 963 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    6546200..6548092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112784.3 → NP_566622.1  EIN2 targeting protein1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566622.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LB99, Q9LJ68
    UniProtKB/TrEMBL
    A0A178V4Q5, A0A5S9XDI6, A0A654FAG4
    Conserved Domains (2) summary
    pfam07734
    Location:214 → 398
    FBA_1; F-box associated
    pfam00646
    Location:1 → 45
    F-box; F-box domain

  2. NM_001084716.2 → NP_001078185.1  EIN2 targeting protein1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078185.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LB99, Q9LJ68
    UniProtKB/TrEMBL
    A0A178V4Q5, A0A5S9XDI6, A0A654FAG4
    Conserved Domains (2) summary
    pfam07734
    Location:214 → 398
    FBA_1; F-box associated
    pfam00646
    Location:1 → 45
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LJ68.1

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