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LPAT5 lysophosphatidyl acyltransferase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821418, updated on 18-Sep-2024

Summary

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Official Symbol
LPAT5
Official Full Name
lysophosphatidyl acyltransferase 5
Primary source
TAIR:AT3G18850
Locus tag
AT3G18850
See related
Araport:AT3G18850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
lysophosphatidyl acyltransferase 5
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Genomic context

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See LPAT5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (6499332..6501432, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene LOW protein: PPR containing-like protein Neighboring gene miscRNA Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LYSOPHOSPHATIDIC ACID ACYLTRANSFERASES 4 and 5 are involved in glycerolipid metabolism and nitrogen starvation response in Arabidopsis. Angkawijaya AE, et al. New Phytol, 2019 Oct. PMID 31211859
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. LPAT4 and LPAT5 may redundantly function in endoplasmic-reticulum-localized de novo glycerolipid biosynthesis for phospholipids and triacylglycerol.
    Title: LYSOPHOSPHATIDIC ACID ACYLTRANSFERASES 4 and 5 are involved in glycerolipid metabolism and nitrogen starvation response in Arabidopsis.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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NM_001035647.3
NM_001084714.1
NM_001084715.1
NM_001338361.1
NM_112771.5
NM_202606.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in CDP-diacylglycerol biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
lysophosphatidyl acyltransferase 5
NP_001030724.2
  • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1763 Blast hits to 1758 proteins in 511 species: Archae - 0; Bacteria - 640; Metazoa - 539; Fungi - 189; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
NP_001078183.1
  • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1767 Blast hits to 1762 proteins in 514 species: Archae - 0; Bacteria - 643; Metazoa - 539; Fungi - 190; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
NP_001078184.1
  • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1643 Blast hits to 1638 proteins in 497 species: Archae - 0; Bacteria - 573; Metazoa - 538; Fungi - 198; Plants - 153; Viruses - 6; Other Eukaryotes - 175 (source: NCBI BLink).
NP_188515.1
  • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1763 Blast hits to 1758 proteins in 511 species: Archae - 0; Bacteria - 640; Metazoa - 539; Fungi - 189; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
NP_974335.1
  • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    6499332..6501432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001035647.3 → NP_001030724.2  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030724.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V3U6, Q9LHN4
    UniProtKB/TrEMBL
    A0A178VAY6, A0A654F9J8
    Conserved Domains (1) summary
    PLN02510
    Location:1 → 375
    PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

  2. NM_202606.2 → NP_974335.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974335.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V3U6, Q9LHN4
    UniProtKB/TrEMBL
    A0A178VAY6, A0A654F9J8
    Conserved Domains (1) summary
    PLN02510
    Location:1 → 375
    PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

  3. NM_112771.5 → NP_188515.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188515.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V3U6, Q9LHN4
    UniProtKB/TrEMBL
    A0A178VAY6, A0A654F9J8
    Conserved Domains (1) summary
    PLN02510
    Location:1 → 375
    PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

  4. NM_001084715.1 → NP_001078184.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078184.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EJE0, F4J9W3
    Conserved Domains (3) summary
    cd07990
    Location:47 → 237
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    PLN02510
    Location:1 → 352
    PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
    pfam16076
    Location:228 → 292
    Acyltransf_C; Acyltransferase C-terminus

  5. NM_001338361.1 → NP_001326795.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQD2

  6. NM_001084714.1 → NP_001078183.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078183.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V3U6, Q9LHN4
    UniProtKB/TrEMBL
    A0A178VAY6, A0A654F9J8
    Conserved Domains (1) summary
    PLN02510
    Location:1 → 375
    PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LHN4.1

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