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TPX2 (targeting protein for Xklp2) protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821318, updated on 18-Sep-2024

Summary

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Official Full Name
TPX2 (targeting protein for Xklp2) protein family
Primary source
TAIR:AT3G01015
Locus tag
AT3G01015
See related
Araport:AT3G01015
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
TEL3N.1; TEL3N_1
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (1609..4159, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene UDP-glucose/GDP-mannose dehydrogenase family protein Neighboring gene ISCU-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Submergence stress-induced hypocotyl elongation through ethylene signaling-mediated regulation of cortical microtubules in Arabidopsis. Wang X, et al. J Exp Bot, 2020 Jan 23. PMID 31638649
  2. Coordinated Regulation of Hypocotyl Cell Elongation by Light and Ethylene through a Microtubule Destabilizing Protein. Ma Q, et al. Plant Physiol, 2018 Jan. PMID 29167353, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Submergence stress-induced hypocotyl elongation through ethylene signaling-mediated regulation of cortical microtubules in Arabidopsis.
    Title: Submergence stress-induced hypocotyl elongation through ethylene signaling-mediated regulation of cortical microtubules in Arabidopsis.
  2. This study reveals a mechanism in which light and ethylene signaling coordinate MDP60 expression to modulate hypocotyl cell elongation by altering cortical microtubules in Arabidopsis.[Mdp60]
    Title: Coordinated Regulation of Hypocotyl Cell Elongation by Light and Ethylene through a Microtubule Destabilizing Protein.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_110965.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables microtubule binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in cortical microtubule organization IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within cortical microtubule organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cortical microtubule organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within microtubule depolymerization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of plant organ morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to ethylene IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to light stimulus IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to water-immersion restraint stress IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to water-immersion restraint stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within unidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in unidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
colocalizes_with microtubule end IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in spindle IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
TPX2 (targeting protein for Xklp2) protein family
NP_186749.2
  • TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1609..4159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_110965.4 → NP_186749.2  TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_186749.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0A178VFR0, Q5XVC4, Q9C7U3
    UniProtKB/TrEMBL
    A0A384K930
    Conserved Domains (1) summary
    pfam06886
    Location:374 → 455
    TPX2; Targeting protein for Xklp2 (TPX2)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5XVC4.1

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