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CAT4 cationic amino acid transporter 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821176, updated on 18-Sep-2024

Summary

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Official Symbol
CAT4
Official Full Name
cationic amino acid transporter 4
Primary source
TAIR:AT3G03720
Locus tag
AT3G03720
See related
Araport:AT3G03720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
cationic amino acid transporter 4; F20H23.25; F20H23_25
Summary
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.
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Genomic context

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See CAT4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Sequence:
Chromosome: 3; NC_003074.8 (925556..930002, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Plasma-membrane choline transporter family protein Neighboring gene polyribonucleotide nucleotidyltransferase Neighboring gene F-box/kelch-repeat protein, putative (DUF295) Neighboring gene F-box/kelch-repeat protein, putative (DUF295)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001161114.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables basic amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plant-type vacuole HDA PubMed 
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
cationic amino acid transporter 4
NP_001154586.1
  • cationic amino acid transporter 4 (CAT4); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Protein of unknown function DUF295 (InterPro:IPR005174), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 2 (TAIR:AT1G58030.1); Has 38139 Blast hits to 35862 proteins in 2359 species: Archae - 591; Bacteria - 30521; Metazoa - 2149; Fungi - 2872; Plants - 748; Viruses - 0; Other Eukaryotes - 1258 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    925556..930002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001161114.2 → NP_001154586.1  cationic amino acid transporter 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154586.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4J170, Q8W4K3, Q9SRU9
    Conserved Domains (2) summary
    TIGR00906
    Location:4 → 579
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:528 → 578
    AA_permease_C; C-terminus of AA_permease
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8W4K3.1

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