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Protein phosphatase 2C family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820905, updated on 18-Sep-2024

Summary

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Official Full Name
Protein phosphatase 2C family protein
Primary source
TAIR:AT3G16560
Locus tag
AT3G16560
See related
Araport:AT3G16560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDC8.3
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (5635593..5638798, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene tRNA-Lys Neighboring gene F-box family protein Neighboring gene threonyl and alanyl tRNA synthetase second additional domain-containing protein Neighboring gene rapid alkalinization factor 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338239.1
NM_001338240.1
NM_112529.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Protein phosphatase 2C family protein
NP_566554.1
  • Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 5306 Blast hits to 5268 proteins in 332 species: Archae - 0; Bacteria - 114; Metazoa - 1381; Fungi - 595; Plants - 2295; Viruses - 5; Other Eukaryotes - 916 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5635593..5638798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338238.1 → NP_001325978.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LCU0, Q9LUS8
    UniProtKB/TrEMBL
    A0A178VFN3, A0A5S9XD34
    Conserved Domains (1) summary
    cd00143
    Location:158 → 480
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. NM_112529.3 → NP_566554.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566554.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LCU0, Q9LUS8
    UniProtKB/TrEMBL
    A0A178VFN3, A0A5S9XD34
    Conserved Domains (1) summary
    cd00143
    Location:158 → 480
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  3. NM_001338239.1 → NP_001325979.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LMW1, A0A5S9XD34
    Conserved Domains (1) summary
    cd00143
    Location:158 → 453
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  4. NM_001338240.1 → NP_001325980.1  Protein phosphatase 2C family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LCU0, Q9LUS8
    UniProtKB/TrEMBL
    A0A178VFN3, A0A5S9XD34
    Conserved Domains (1) summary
    cd00143
    Location:158 → 480
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LUS8.1

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