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JAL31 jacalin-related lectin 31 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820891, updated on 18-Sep-2024

Summary

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Official Symbol
JAL31
Official Full Name
jacalin-related lectin 31
Primary source
TAIR:AT3G16430
Locus tag
AT3G16430
See related
Araport:AT3G16430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
jacalin-related lectin 31; PBPII
Summary
Encodes a protein that increases the beta-glucosidase activities of three scopolin glucosidases in vitro.
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Genomic context

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See JAL31 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (5581568..5583258)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene PYK10-binding protein 1 Neighboring gene uncharacterized protein Neighboring gene myrosinase-binding protein-like protein-300B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The proteome landscape of the root cap reveals a role for the jacalin-associated lectin JAL10 in the salt-induced endoplasmic reticulum stress pathway. Das KK, et al. Plant Commun, 2023 Nov 13. PMID 37789617, Free PMC Article
  2. Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry. Kung CC, et al. Proteomics, 2006 May. PMID 16526091
  3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_112514.3
NM_180264.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables copper ion binding HDA PubMed 
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in response to salt stress IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
jacalin-related lectin 31
NP_188264.1
  • jacalin-related lectin 31 (JAL31); FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: PYK10-binding protein 1 (TAIR:AT3G16420.3); Has 1533 Blast hits to 750 proteins in 40 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 1528; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_850595.1
  • jacalin-related lectin 31 (JAL31); FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: PYK10-binding protein 1 (TAIR:AT3G16420.3); Has 1533 Blast hits to 750 proteins in 40 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 1528; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5581568..5583258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112514.3 → NP_188264.1  jacalin-related lectin 31 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188264.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04313
    UniProtKB/TrEMBL
    A0A178VEL7, A0A5S9XD79
    Conserved Domains (1) summary
    pfam01419
    Location:161 → 293
    Jacalin; Jacalin-like lectin domain

  2. NM_180264.3 → NP_850595.1  jacalin-related lectin 31 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850595.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04313
    UniProtKB/TrEMBL
    A0A178VEL7, A0A5S9XD79
    Conserved Domains (1) summary
    pfam01419
    Location:161 → 293
    Jacalin; Jacalin-like lectin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O04313.1

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