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UDP-Glycosyltransferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820838, updated on 18-Sep-2024

Summary

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Official Full Name
UDP-Glycosyltransferase superfamily protein
Primary source
TAIR:AT3G15940
Locus tag
AT3G15940
See related
Araport:AT3G15940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (5393451..5396994, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Phox (PX) domain-containing protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene DNA topoisomerase-like protein Neighboring gene mismatched DNA binding / ATP binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001202977.2
NM_112464.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 

General protein information

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Preferred Names
UDP-Glycosyltransferase superfamily protein
NP_001189906.1
  • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1).
NP_188215.1
  • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1); Has 9778 Blast hits to 9756 proteins in 1676 species: Archae - 288; Bacteria - 7022; Metazoa - 45; Fungi - 51; Plants - 181; Viruses - 0; Other Eukaryotes - 2191 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5393451..5396994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202977.2 → NP_001189906.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189906.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VIV5, A0A5S9XD36, A0A654F7L8, Q9LSB5
    Conserved Domains (2) summary
    cd03801
    Location:237 → 691
    GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase
    pfam16994
    Location:234 → 404
    Glyco_trans_4_5; Glycosyl-transferase family 4

  2. NM_112464.3 → NP_188215.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188215.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VIV5, A0A5S9XD36, A0A654F7L8, Q9LSB5
    Conserved Domains (2) summary
    cd03801
    Location:237 → 691
    GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase
    pfam16994
    Location:234 → 404
    Glyco_trans_4_5; Glycosyl-transferase family 4
Nucleotide Protein
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