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Plant stearoyl-acyl-carrier-protein desaturase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820737, updated on 18-Sep-2024

Summary

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Official Full Name
Plant stearoyl-acyl-carrier-protein desaturase family protein
Primary source
TAIR:AT3G02620
Locus tag
AT3G02620
See related
Araport:AT3G02620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16B3.25; F16B3_25
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (560182..561979)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene lipid phosphate phosphatase 3 Neighboring gene plant stearoyl-acyl-carrier desaturase family protein Neighboring gene Plant stearoyl-acyl-carrier-protein desaturase family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_111130.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables stearoyl-[ACP] desaturase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Plant stearoyl-acyl-carrier-protein desaturase family protein
NP_186911.2
  • Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Fatty acid desaturase, type 2 (InterPro:IPR005067), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02610.1); Has 952 Blast hits to 944 proteins in 218 species: Archae - 0; Bacteria - 446; Metazoa - 2; Fungi - 0; Plants - 447; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    560182..561979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337427.1 → NP_001327879.1  Plant stearoyl-acyl-carrier-protein desaturase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VGR6, A0A1I9LTN8, A0A384KYA0, A0A5S9X8I0
    Conserved Domains (1) summary
    PLN00179
    Location:16 → 406
    PLN00179; acyl- [acyl-carrier protein] desaturase

  2. NM_001337428.1 → NP_001327880.1  Plant stearoyl-acyl-carrier-protein desaturase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LTN9, A0A5S9X8I0

  3. NM_111130.3 → NP_186911.2  Plant stearoyl-acyl-carrier-protein desaturase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_186911.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M880
    UniProtKB/TrEMBL
    A0A5S9X8I0
    Conserved Domains (1) summary
    PLN00179
    Location:13 → 403
    PLN00179; acyl- [acyl-carrier protein] desaturase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M880.2

Gene LinkOut

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