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Terpenoid cyclases/Protein prenyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820680, updated on 18-Sep-2024

Summary

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Official Full Name
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Primary source
TAIR:AT3G14540
Locus tag
AT3G14540
See related
Araport:AT3G14540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (4881320..4884012, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene Terpenoid synthases superfamily protein Neighboring gene geranylgeranyl pyrophosphate synthase 3 Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001338121.1
NM_112314.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables terpene synthase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in diterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Terpenoid cyclases/Protein prenyltransferases superfamily protein
NP_188072.1
  • Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1707 Blast hits to 1675 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4881320..4884012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112314.3 → NP_188072.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188072.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84UU5, Q9LUE0
    UniProtKB/TrEMBL
    A0A5S9XCB3
    Conserved Domains (1) summary
    cd00684
    Location:60 → 598
    Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1

  2. NM_001338121.1 → NP_001325469.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LLB9, A0A5S9XCB3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LUE0.1

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