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NB-ARC domain-containing disease resistance protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820670, updated on 18-Sep-2024

Summary

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Official Full Name
NB-ARC domain-containing disease resistance protein
Primary source
TAIR:AT3G14470
Locus tag
AT3G14470
See related
Araport:AT3G14470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (4857464..4861293)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene LRR and NB-ARC domains-containing disease resistance protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glycine/proline-rich protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana. Chang IF, et al. Proteomics, 2009 Jun. PMID 19452453, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338120.1
NM_112307.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NB-ARC domain-containing disease resistance protein
NP_001319549.1
  • NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4857464..4861293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338120.1 → NP_001319549.1  NB-ARC domain-containing disease resistance protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LRR4
    UniProtKB/TrEMBL
    A0A178VHJ0, A0A654F8G6
    Conserved Domains (4) summary
    COG4886
    Location:576 → 699
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:580 → 603
    LRR_1; leucine-rich repeat [structural motif]
    pfam00931
    Location:175 → 419
    NB-ARC; NB-ARC domain
    pfam18052
    Location:8 → 95
    Rx_N; Rx N-terminal domain

  2. NM_112307.3 → NP_188065.1  NB-ARC domain-containing disease resistance protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188065.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LRR4
    UniProtKB/TrEMBL
    A0A178VHJ0, A0A654F8G6
    Conserved Domains (4) summary
    COG4886
    Location:576 → 699
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:580 → 603
    LRR_1; leucine-rich repeat [structural motif]
    pfam00931
    Location:175 → 419
    NB-ARC; NB-ARC domain
    pfam18052
    Location:8 → 95
    Rx_N; Rx N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LRR4.1

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