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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820661, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT3G14395
Locus tag
AT3G14395
See related
Araport:AT3G14395
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (4810888..4811481)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Pyridoxal-dependent decarboxylase family protein Neighboring gene ubiquitin-specific protease 25 Neighboring gene Nucleotide/sugar transporter family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MATI, a Novel Protein Involved in the Regulation of Herbivore-Associated Signaling Pathways. Santamaría ME, et al. Front Plant Sci, 2017. PMID 28649257, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_112298.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell redox homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within defense response to insect IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within jasmonic acid mediated signaling pathway IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within photosynthesis IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within positive regulation of defense response to insect IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to herbivore IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within salicylic acid mediated signaling pathway IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endomembrane system IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_566485.1
  • unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4810888..4811481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112298.5 → NP_566485.1  uncharacterized protein AT3G14395 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566485.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VMN9, A0A384LES5, Q8L923
Nucleotide Protein
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