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Phosphoinositide phosphatase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820638, updated on 18-Sep-2024

Summary

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Official Full Name
Phosphoinositide phosphatase family protein
Primary source
TAIR:AT3G14205
Locus tag
AT3G14205
See related
Araport:AT3G14205
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SAC2; suppressor of actin 2
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Genomic context

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Location:
chromosome: 3
Exon count:
16
Sequence:
Chromosome: 3; NC_003074.8 (4715650..4721003, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene ncRNA Neighboring gene GDSL-like lipase/acylhydrolase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_001338113.1
NM_112277.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Phosphoinositide phosphatase family protein
NP_566481.1
  • Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4715650..4721003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112277.4 → NP_566481.1  Phosphoinositide phosphatase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566481.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94A27, Q9LJG4
    UniProtKB/TrEMBL
    A0A178VLV7, A0A5S9XC10
    Conserved Domains (1) summary
    pfam02383
    Location:94 → 392
    Syja_N; SacI homology domain

  2. NM_001338113.1 → NP_001325524.1  Phosphoinositide phosphatase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VL78, A0A1I9LLH9, A0A384K955
    Conserved Domains (1) summary
    pfam02383
    Location:1 → 217
    Syja_N; SacI homology domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94A27.1

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