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hypothetical protein (DUF3511) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820604, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF3511)
Primary source
TAIR:AT3G13910
Locus tag
AT3G13910
See related
Araport:AT3G13910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (4590684..4591541, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene myb domain protein 26 Neighboring gene EPIDERMAL PATTERNING FACTOR-like protein Neighboring gene ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Neighboring gene eukaryotic translation initiation factor 4A1 Neighboring gene ncRNA Neighboring gene Dihydrolipoamide acetyltransferase, long form protein Neighboring gene DNA binding / DNA-directed RNA polymerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH. Brown BA, et al. Plant Physiol, 2008 Feb. PMID 18055587, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

NM_112245.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF3511)
NP_566468.1
  • Protein of unknown function (DUF3511); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3511 (InterPro:IPR021899); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3511) (TAIR:AT5G11970.1); Has 203 Blast hits to 203 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4590684..4591541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338091.1 → NP_001326696.1  hypothetical protein (DUF3511) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQ26, Q8LDW0

  2. NM_112245.2 → NP_566468.1  hypothetical protein (DUF3511) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566468.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VER2, A0A384KQX8, Q8LDW0, Q9LVK8
    Conserved Domains (1) summary
    pfam12023
    Location:61 → 97
    DUF3511; Domain of unknown function (DUF3511)
Nucleotide Protein
Heading Accession and Version

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