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NUDT16 nudix hydrolase homolog 16 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820440, updated on 18-Sep-2024

Summary

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Official Symbol
NUDT16
Official Full Name
nudix hydrolase homolog 16
Primary source
TAIR:AT3G12600
Locus tag
AT3G12600
See related
Araport:AT3G12600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
atnudt16; nudix hydrolase homolog 16
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Genomic context

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See NUDT16 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (4004469..4006330)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Oligosaccaryltransferase Neighboring gene tRNA-Arg Neighboring gene uncharacterized protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Protein phosphatase 2C family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001084673.1
NM_112095.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables pyrophosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
nudix hydrolase homolog 16
NP_001078142.1
  • nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
NP_566428.1
  • nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1169 Blast hits to 1168 proteins in 345 species: Archae - 0; Bacteria - 470; Metazoa - 236; Fungi - 123; Plants - 235; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4004469..4006330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112095.4 → NP_566428.1  nudix hydrolase homolog 16 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566428.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8MR20, Q9LHK1
    UniProtKB/TrEMBL
    A0A178VBK9, A0A5S9XBG5, A0A654F6G4
    Conserved Domains (1) summary
    cd04666
    Location:21 → 155
    Nudix_Hydrolase_9; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

  2. NM_001084673.1 → NP_001078142.1  nudix hydrolase homolog 16 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078142.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654F6G4
    Conserved Domains (1) summary
    cd04666
    Location:12 → 146
    Nudix_Hydrolase_9; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LHK1.1

Gene LinkOut

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