Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Adenine nucleotide alpha hydrolases-like superfamily protein
Primary source: TAIR:AT3G11930
Locus tag: AT3G11930
See related: Araport:AT3G11930
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 3

Sequence:: Chromosome: 3; NC_003074.8 (3776177..3777751)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001035598.1

Supported by ESTs:

NM_112026.2

Supported by ESTs:

NM_180231.3

Supported by ESTs:

NM_180232.2

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in cytoplasm	ISM Inferred from Sequence Model more info
located_in cytosol	HDA more info	PubMed

General protein information

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Preferred Names: Adenine nucleotide alpha hydrolases-like superfamily protein

NP_001030675.1

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NP_566406.1

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 5625 Blast hits to 5442 proteins in 1151 species: Archae - 389; Bacteria - 4083; Metazoa - 138; Fungi - 112; Plants - 752; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink).

NP_850562.1

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 5467 Blast hits to 5289 proteins in 1122 species: Archae - 381; Bacteria - 3940; Metazoa - 138; Fungi - 108; Plants - 754; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).

NP_850563.1

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 1302 Blast hits to 1300 proteins in 219 species: Archae - 85; Bacteria - 399; Metazoa - 112; Fungi - 0; Plants - 685; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

3776177..3777751

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_180231.3 → NP_850562.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_850562.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V9R3, A0A384KK41, A0A7G2EPB7, Q9SF06

Conserved Domains (1) summary

cd00293
Location:34 → 192

USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...
NM_180232.2 → NP_850563.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_850563.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2EPB7, B9DG73

Conserved Domains (1) summary

cd00293
Location:34 → 218

USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...
NM_112026.2 → NP_566406.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_566406.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V832, A0A384KUI9, A0A7G2EN99, F4J8J7, Q8L9C2

Conserved Domains (1) summary

cd00293
Location:34 → 191

USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...
NM_001035598.1 → NP_001030675.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001030675.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2EPB7, F4J7I5

Conserved Domains (1) summary

cd00293
Location:34 → 193

USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...