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myosin-binding protein (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820358, updated on 18-Sep-2024

Summary

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Official Full Name
myosin-binding protein (Protein of unknown function, DUF593)
Primary source
TAIR:AT3G11850
Locus tag
AT3G11850
See related
Araport:AT3G11850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (3738753..3741753, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene E3 ubiquitin-protein ligase PUB24-like protein Neighboring gene sterile alpha motif (SAM) domain protein Neighboring gene Endoribonuclease/protein kinase IRE1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
  2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_112018.4
NM_202560.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
myosin-binding protein (Protein of unknown function, DUF593)
NP_187791.1
  • Protein of unknown function, DUF593; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G06560.1); Has 665 Blast hits to 623 proteins in 106 species: Archae - 4; Bacteria - 38; Metazoa - 138; Fungi - 31; Plants - 334; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
NP_974289.1
  • Protein of unknown function, DUF593; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G06560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3738753..3741753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202560.2 → NP_974289.1  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974289.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCN1, Q9SF14
    Conserved Domains (1) summary
    pfam04576
    Location:63 → 154
    Zein-binding

  2. NM_112018.4 → NP_187791.1  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187791.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCN1, Q9SF14
    Conserved Domains (1) summary
    pfam04576
    Location:63 → 154
    Zein-binding
Nucleotide Protein
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