U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ELO1 Paxneb protein-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820292, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
ELO1
Official Full Name
Paxneb protein-like protein
Primary source
TAIR:AT3G11220
Locus tag
AT3G11220
See related
Araport:AT3G11220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ELONGATA 1
Summary
A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1#AeiELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ELO1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (3513350..3516447, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene alfin-like 2 Neighboring gene SGNH hydrolase-type esterase superfamily protein Neighboring gene Yippee family putative zinc-binding protein Neighboring gene arginine-tRNA protein transferase 2 Neighboring gene Ribosomal protein L10 family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Cytological investigations of the Arabidopsis thaliana elo1 mutant give new insights into leaf lateral growth and Elongator function. Falcone A, et al. Ann Bot, 2007 Aug. PMID 17565971, Free PMC Article
  2. The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth. Nelissen H, et al. Proc Natl Acad Sci U S A, 2005 May 24. PMID 15894610, Free PMC Article
  3. Evolutionary Conservation in Protein-Protein Interactions and Structures of the Elongator Sub-Complex ELP456 from Arabidopsis and Yeast. Jun SE, et al. Int J Mol Sci, 2024 Apr 15. PMID 38673955, Free PMC Article
  4. Elongator mediates ABA responses, oxidative stress resistance and anthocyanin biosynthesis in Arabidopsis. Zhou X, et al. Plant J, 2009 Oct. PMID 19500300
  5. Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation. Nelissen H, et al. Proc Natl Acad Sci U S A, 2010 Jan 26. PMID 20080602, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. show that the Elongator (elo1, elo2, and elo3) complex was purified from plant cell cultures as a six-component complex.
    Title: Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation.
  2. Electron microscopy of an elo mutant showed a hypotonic vacuole, alterations in the size of grana and starch grains in the chloroplasts, and the massive presence of Golgi vesicles in the cytoplasm.
    Title: Cytological investigations of the Arabidopsis thaliana elo1 mutant give new insights into leaf lateral growth and Elongator function.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001337916.1
NM_111957.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cellular response to sucrose stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of anthocyanin metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within organ growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of auxin mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of carbon utilization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of leaf development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to abscisic acid IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of elongator holoenzyme complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Paxneb protein-like protein
NP_001319522.1
  • ELONGATA 1 (ELO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, organ growth; LOCATED IN: Elongator holoenzyme complex; CONTAINS InterPro DOMAIN/s: Elongator complex protein 4 (InterPro:IPR008728); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
NP_566388.2
  • ELONGATA 1 (ELO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, organ growth; LOCATED IN: Elongator holoenzyme complex; CONTAINS InterPro DOMAIN/s: Elongator complex protein 4 (InterPro:IPR008728); Has 319 Blast hits to 294 proteins in 144 species: Archae - 2; Bacteria - 2; Metazoa - 142; Fungi - 99; Plants - 52; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3513350..3516447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111957.5 → NP_566388.2  Paxneb protein-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566388.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4J676, Q4W0V9, Q8W4Q0, Q9C778
    UniProtKB/TrEMBL
    A0A178VAE5, A0A654F762
    Conserved Domains (1) summary
    pfam05625
    Location:20 → 355
    PAXNEB; PAXNEB protein

  2. NM_001337916.1 → NP_001319522.1  Paxneb protein-like protein [Arabidopsis thaliana]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C778.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools