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PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820269, updated on 18-Sep-2024

Summary

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Official Full Name
PLAC8 family protein
Primary source
TAIR:AT3G10980
Locus tag
AT3G10980
See related
Araport:AT3G10980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (3438212..3441299)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene uncharacterized protein Neighboring gene senescence associated gene 20 Neighboring gene LURP-one-like protein (DUF567)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_111935.6

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
PLAC8 family protein
NP_187709.5
  • PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461), Protein of unknown function DUF2985 (InterPro:IPR021369); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G05350.1); Has 166 Blast hits to 162 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 150; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3438212..3441299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111935.6 → NP_187709.5  PLAC8 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187709.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V928, A0A384LFK6, A0A5S9XAY0, A0A654F5X9, Q8W4N1
    Conserved Domains (2) summary
    TIGR01571
    Location:334 → 470
    A_thal_Cys_rich; uncharacterized Cys-rich domain
    pfam11204
    Location:121 → 198
    DUF2985; Protein of unknown function (DUF2985)
Nucleotide Protein
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