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Glycosyl hydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820260, updated on 18-Sep-2024

Summary

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Official Full Name
Glycosyl hydrolase superfamily protein
Primary source
TAIR:AT3G10900
Locus tag
AT3G10900
See related
Araport:AT3G10900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (3410252..3412070, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cytochrome b-c1 complex, subunit 8 protein Neighboring gene methyl esterase 17 Neighboring gene tropomyosin Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene Reticulon family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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NM_111927.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mannan endo-1,4-beta-mannosidase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Glycosyl hydrolase superfamily protein
NP_187701.1
  • Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 769 Blast hits to 758 proteins in 191 species: Archae - 23; Bacteria - 211; Metazoa - 0; Fungi - 191; Plants - 306; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3410252..3412070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111927.1 → NP_187701.1  Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187701.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SG95
    UniProtKB/TrEMBL
    A0A178V9S7, A0A5S9XAX0
    Conserved Domains (1) summary
    cl23725
    Location:46 → 351
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SG95.1

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