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PAP16 purple acid phosphatase 16 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820178, updated on 18-Sep-2024

Summary

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Official Symbol
PAP16
Official Full Name
purple acid phosphatase 16
Primary source
TAIR:AT3G10150
Locus tag
AT3G10150
See related
Araport:AT3G10150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATPAP16; purple acid phosphatase 16
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Genomic context

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See PAP16 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (3137362..3139169, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SOUL heme-binding family protein Neighboring gene uncharacterized protein Neighboring gene RECA homolog 3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DHFS-FPGS homolog C Neighboring gene Gibberellin-regulated family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower. Zhu H, et al. Plant Mol Biol, 2005 Nov. PMID 16244908
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001337859.1
NM_111850.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acid phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
purple acid phosphatase 16
NP_187626.1
  • purple acid phosphatase 16 (PAP16); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 28 (TAIR:AT5G57140.1); Has 563 Blast hits to 562 proteins in 197 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 196; Plants - 110; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3137362..3139169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111850.4 → NP_187626.1  purple acid phosphatase 16 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187626.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6DBI6, Q6GWE0, Q9SR79
    UniProtKB/TrEMBL
    A0A178VB90, A0A5S9XAT3
    Conserved Domains (1) summary
    cd07383
    Location:33 → 329
    MPP_Dcr2; Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain

  2. NM_001337859.1 → NP_001326965.1  purple acid phosphatase 16 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQV7, A0A5S9XAT3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SR79.1

Gene LinkOut

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