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aspartate/glutamate/uridylate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820164, updated on 18-Sep-2024

Summary

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Official Full Name
aspartate/glutamate/uridylate kinase family protein
Primary source
TAIR:AT3G10030
Locus tag
AT3G10030
See related
Araport:AT3G10030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (3092016..3095025, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene plant/protein Neighboring gene tRNA-Arg Neighboring gene sequence-specific DNA binding transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Koroleva OA, et al. Plant J, 2005 Jan. PMID 15610358
  2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001084660.1
NM_111838.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables UMP kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in 'de novo' CTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
aspartate/glutamate/uridylate kinase family protein
NP_001078129.1
  • aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink).
NP_566366.1
  • aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7827 Blast hits to 7823 proteins in 2703 species: Archae - 182; Bacteria - 5697; Metazoa - 42; Fungi - 3; Plants - 388; Viruses - 0; Other Eukaryotes - 1515 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3092016..3095025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111838.4 → NP_566366.1  aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566366.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBU4, A0A384L583, Q94JR1
    Conserved Domains (2) summary
    cd04254
    Location:303 → 535
    AAK_UMPK-PyrH-Ec; UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and ...
    pfam13837
    Location:158 → 244
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  2. NM_001084660.1 → NP_001078129.1  aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078129.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654F5N0, Q9SR68
    Conserved Domains (2) summary
    cd04254
    Location:303 → 509
    AAK_UMPK-PyrH-Ec; UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and ...
    pfam13837
    Location:158 → 248
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
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