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Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820153, updated on 18-Sep-2024

Summary

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Official Full Name
Pollen Ole e 1 allergen and extensin family protein
Primary source
TAIR:AT3G09925
Locus tag
AT3G09925
See related
Araport:AT3G09925
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (3051609..3052850, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene phosphatidyl inositol monophosphate 5 kinase Neighboring gene induced by phosphate starvation1 Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene monodehydroascorbate reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_148700.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pollen Ole e 1 allergen and extensin family protein
NP_683542.1
  • Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G05500.1); Has 222 Blast hits to 222 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3051609..3052850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148700.2 → NP_683542.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_683542.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCU0, A0A5S9XAL2, A0A654F5M4, F4J2H2
    Conserved Domains (1) summary
    pfam01190
    Location:38 → 129
    Pollen_Ole_e_I; Pollen proteins Ole e I like
Nucleotide Protein
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