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BSK9 kinase with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820080, updated on 18-Sep-2024

Summary

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Official Symbol
BSK9
Official Full Name
kinase with tetratricopeptide repeat domain-containing protein
Primary source
TAIR:AT3G09240
Locus tag
AT3G09240
See related
Araport:AT3G09240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
brassinosteroid-signaling kinase 9
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Genomic context

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See BSK9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_003074.8 (2835381..2838202, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L10 family protein Neighboring gene plastid transcriptionally active 13 Neighboring gene laccase 7 Neighboring gene myb domain protein 1 Neighboring gene Nuclear transport factor 2 (NTF2) family protein Neighboring gene ncRNA Neighboring gene Glycosyl hydrolase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
kinase with tetratricopeptide repeat domain-containing protein
NP_187535.1
  • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G01060.1); Has 27971 Blast hits to 27600 proteins in 1024 species: Archae - 10; Bacteria - 1536; Metazoa - 3854; Fungi - 205; Plants - 21349; Viruses - 84; Other Eukaryotes - 933 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2835381..2838202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337809.1 → NP_001325594.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBH8, A0A1I9LLQ2, A0A384KK65, A0A5S9XBJ6
    Conserved Domains (3) summary
    PLN03088
    Location:393 → 490
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:394 → 419
    TPR; TPR repeat [structural motif]
    cl21453
    Location:72 → 315
    PKc_like; Protein Kinases, catalytic domain

  2. NM_001337808.1 → NP_001325595.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VA65, A0A1I9LLQ3

  3. NM_111758.1 → NP_187535.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187535.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XBJ6, Q9SR39
    Conserved Domains (4) summary
    sd00006
    Location:379 → 404
    TPR; TPR repeat [structural motif]
    pfam00069
    Location:58 → 289
    Pkinase; Protein kinase domain
    pfam13414
    Location:379 → 436
    TPR_11; TPR repeat
    cl21453
    Location:57 → 300
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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