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Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820028, updated on 18-Sep-2024

Summary

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Official Full Name
Galactose oxidase/kelch repeat superfamily protein
Primary source
TAIR:AT3G08810
Locus tag
AT3G08810
See related
Araport:AT3G08810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (2675470..2676708, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene BRISC complex subunit Abro1-like protein Neighboring gene ENTH/VHS/GAT family protein Neighboring gene ARM repeat superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene D-alanine-D-alanine ligase family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis DREAM complex antagonizes WDR5A to modulate histone H3K4me2/3 deposition for a subset of genome repression. Wang Y, et al. Proc Natl Acad Sci U S A, 2022 Jul 5. PMID 35759663, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_111715.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Galactose oxidase/kelch repeat superfamily protein
NP_187493.1
  • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G51250.1); Has 748 Blast hits to 733 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 747; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2675470..2676708 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111715.3 → NP_187493.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187493.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9X9, Q9SR81
    UniProtKB/TrEMBL
    A0A178VNR3, A0A654F5A5
    Conserved Domains (2) summary
    pfam00646
    Location:25 → 64
    F-box; F-box domain
    pfam13964
    Location:126 → 169
    Kelch_6; Kelch motif
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C9X9.1

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