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PAS domain-containing protein tyrosine kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819841, updated on 18-Sep-2024

Summary

Official Full Name
PAS domain-containing protein tyrosine kinase family protein
Primary source
TAIR:AT3G06620
Locus tag
AT3G06620
See related
Araport:AT3G06620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5E6.5; F5E6_5
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Genomic context

Location:
chromosome: 3
Exon count:
13
Sequence:
Chromosome: 3; NC_003074.8 (2062131..2067417, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Mevalonate/galactokinase family protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene uncharacterized protein Neighboring gene DNA-binding enhancer protein-like protein Neighboring gene ncRNA Neighboring gene protein kinase family protein Neighboring gene PAS domain-containing protein tyrosine kinase family protein

General gene information

NM_111538.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine/tyrosine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
PAS domain-containing protein tyrosine kinase family protein
NP_187314.1
  • PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125703 Blast hits to 124182 proteins in 4625 species: Archae - 237; Bacteria - 14697; Metazoa - 46775; Fungi - 11283; Plants - 33084; Viruses - 499; Other Eukaryotes - 19128 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2062131..2067417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111538.4NP_187314.1  PAS domain-containing protein tyrosine kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187314.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VP51, A0A384LDB3, Q9C902
    Conserved Domains (2) summary
    cd13999
    Location:500746
    STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
    pfam00989
    Location:103210
    PAS; PAS fold