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Cox19-like CHCH family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819805, updated on 18-Sep-2024

Summary

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Official Full Name
Cox19-like CHCH family protein
Primary source
TAIR:AT3G06310
Locus tag
AT3G06310
See related
Araport:AT3G06310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F24P17.23; F24P17_23
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (1912805..1914442, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SAC3/GANP/Nin1/mts3/eIF-3 p25 family Neighboring gene P4H isoform 2 Neighboring gene miscRNA Neighboring gene Ribosomal protein L33 family protein Neighboring gene RING/U-box superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Internal architecture of mitochondrial complex I from Arabidopsis thaliana. Klodmann J, et al. Plant Cell, 2010 Mar. PMID 20197505, Free PMC Article
  2. Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. Meyer EH, et al. J Proteome Res, 2008 Feb. PMID 18189341
  3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_001125117.2
NM_001202895.1
NM_111506.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in mitochondrial electron transport, NADH to ubiquinone IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 
part_of respiratory chain complex I HDA PubMed 
part_of respiratory chain complex I IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Cox19-like CHCH family protein
NP_001118589.1
  • Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G18800.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001189824.1
  • Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G18800.2).
NP_566280.1
  • Cox19-like CHCH family protein; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G18800.2); Has 415 Blast hits to 415 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 109; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1912805..1914442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202895.1 → NP_001189824.1  Cox19-like CHCH family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189824.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SQT4
    UniProtKB/TrEMBL
    A0A178VNM9, A0A5S9X9X5
    Conserved Domains (1) summary
    pfam06747
    Location:73 → 103
    CHCH; CHCH domain

  2. NM_111506.5 → NP_566280.1  Cox19-like CHCH family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566280.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SQT4
    UniProtKB/TrEMBL
    A0A178VNM9, A0A5S9X9X5
    Conserved Domains (1) summary
    pfam06747
    Location:73 → 103
    CHCH; CHCH domain

  3. NM_001125117.2 → NP_001118589.1  Cox19-like CHCH family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118589.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H556
    Conserved Domains (1) summary
    pfam16860
    Location:24 → 62
    CX9C; CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SQT4.1

Gene LinkOut

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