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BTB/POZ domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819735, updated on 18-Sep-2024

Summary

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Official Full Name
BTB/POZ domain-containing protein
Primary source
TAIR:AT3G05675
Locus tag
AT3G05675
See related
Araport:AT3G05675
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (1657758..1660429, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene receptor like protein 33 Neighboring gene RING/U-box protein Neighboring gene ncRNA Neighboring gene embryo defective 2016 Neighboring gene Cystatin/monellin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001337598.1
NM_111441.3
NM_180187.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
BTB/POZ domain-containing protein
NP_566255.1
  • BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
NP_850518.1
  • BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1657758..1660429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111441.3 → NP_566255.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566255.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WNA3, Q8LFC6, Q8RX01
    UniProtKB/TrEMBL
    A0A178VMR2, A0A5S9X9E8
    Conserved Domains (1) summary
    cl02518
    Location:20 → 131
    BTB; BTB/POZ domain

  2. NM_001337598.1 → NP_001325506.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WNA3, Q8LFC6, Q8RX01
    UniProtKB/TrEMBL
    A0A178VMR2, A0A5S9X9E8
    Conserved Domains (1) summary
    cl02518
    Location:20 → 131
    BTB; BTB/POZ domain

  3. NM_180187.2 → NP_850518.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850518.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WNA3, Q8LFC6, Q8RX01
    UniProtKB/TrEMBL
    A0A178VMR2, A0A5S9X9E8
    Conserved Domains (1) summary
    cl02518
    Location:20 → 131
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RX01.1

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