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MIRO3 MIRO-related GTP-ase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819695, updated on 18-Sep-2024

Summary

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Official Symbol
MIRO3
Official Full Name
MIRO-related GTP-ase 3
Primary source
TAIR:AT3G05310
Locus tag
AT3G05310
See related
Araport:AT3G05310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MIRO-related GTP-ase 3; T12H1.28; T12H1_28
Summary
Encodes a protein with similarity to MIRO GTPases.
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Genomic context

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See MIRO3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Sequence:
Chromosome: 3; NC_003074.8 (1510160..1513301)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene peroxisomal adenine nucleotide carrier 1 Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene O-fucosyltransferase family protein Neighboring gene Cyclin family protein Neighboring gene cyclin family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_001337575.1
NM_001337576.1
NM_111404.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MIRO-related GTP-ase 3
NP_187182.1
  • MIRO-related GTP-ase 3 (MIRO3); FUNCTIONS IN: GTP binding; INVOLVED IN: mitochondrion transport along microtubule, small GTPase mediated signal transduction; LOCATED IN: mitochondrial outer membrane, intracellular; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Mitochondrial Rho GTPase (InterPro:IPR021181), EF-HAND 2 (InterPro:IPR018249), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 1 (TAIR:AT5G27540.2); Has 1943 Blast hits to 1932 proteins in 256 species: Archae - 0; Bacteria - 18; Metazoa - 950; Fungi - 261; Plants - 517; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1510160..1513301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111404.1 → NP_187182.1  MIRO-related GTP-ase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187182.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9MA88
    UniProtKB/TrEMBL
    A0A178VHL0
    Conserved Domains (5) summary
    cd01892
    Location:424 → 611
    Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
    COG1100
    Location:426 → 628
    Gem1; GTPase SAR1 family domain [General function prediction only]
    pfam08355
    Location:353 → 418
    EF_assoc_1; EF hand associated
    pfam08356
    Location:232 → 314
    EF_assoc_2; EF hand associated
    cl21455
    Location:13 → 180
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. NM_001337575.1 → NP_001327041.1  MIRO-related GTP-ase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LR36

  3. NM_001337576.1 → NP_001327040.1  MIRO-related GTP-ase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LR35
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MA88.1

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