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glycine-rich protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819622, updated on 18-Sep-2024

Summary

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Official Full Name
glycine-rich protein
Primary source
TAIR:AT3G04640
Locus tag
AT3G04640
See related
Araport:AT3G04640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7O18.12; F7O18_12
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (1260906..1261683, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Alba DNA/RNA-binding protein Neighboring gene WVD2-like 1 Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene F-box and associated interaction domains-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
  2. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
  3. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001084636.2
NM_001084637.1
NM_111336.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
Component Evidence Code Pubs
located_in membrane TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
glycine-rich protein
NP_001078105.1
  • glycine-rich protein; Has 42937 Blast hits to 13549 proteins in 1124 species: Archae - 42; Bacteria - 16604; Metazoa - 12821; Fungi - 2296; Plants - 5249; Viruses - 609; Other Eukaryotes - 5316 (source: NCBI BLink).
NP_001078106.1
  • glycine-rich protein; Has 24 Blast hits to 24 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_566234.1
  • glycine-rich protein; Has 42937 Blast hits to 13549 proteins in 1124 species: Archae - 42; Bacteria - 16604; Metazoa - 12821; Fungi - 2296; Plants - 5249; Viruses - 609; Other Eukaryotes - 5316 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1260906..1261683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001084637.1 → NP_001078106.1  glycine-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078106.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQJ2

  2. NM_111336.2 → NP_566234.1  glycine-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566234.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VLU4, Q8L933, Q9SR10

  3. NM_001084636.2 → NP_001078105.1  glycine-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078105.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VLU4, Q8L933, Q9SR10
Nucleotide Protein
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