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exportin-4 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819605, updated on 18-Sep-2024

Summary

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Official Full Name
exportin-4 protein
Primary source
TAIR:AT3G04490
Locus tag
AT3G04490
See related
Araport:AT3G04490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T27C4.14; T27C4_14
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Genomic context

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Location:
chromosome: 3
Exon count:
32
Sequence:
Chromosome: 3; NC_003074.8 (1200331..1209970)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene endoribonuclease Neighboring gene ncRNA Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_111320.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within nuclear export IDA
Inferred from Direct Assay
more info
  

General protein information

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Preferred Names
exportin-4 protein
NP_187099.6
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1); Has 75 Blast hits to 64 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1200331..1209970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337529.1 → NP_001326636.1  exportin-4 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LPW2, A0A5S9X8Z9, A0A654F427

  2. NM_001337530.1 → NP_001326638.1  exportin-4 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBA8, A0A1I9LPW4

  3. NM_001337531.1 → NP_001326637.1  exportin-4 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBA8, A0A1I9LPW3

  4. NM_111320.6 → NP_187099.6  exportin-4 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187099.6

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBA8, F4J3Q2
Nucleotide Protein
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