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DUF3754 family protein, putative (DUF3754) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819305, updated on 18-Sep-2024

Summary

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Official Full Name
DUF3754 family protein, putative (DUF3754)
Primary source
TAIR:AT2G46915
Locus tag
AT2G46915
See related
Araport:AT2G46915
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
15
Sequence:
Chromosome: 2; NC_003071.7 (19273899..19277773, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) Neighboring gene transcription factor-like protein Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene Pectinacetylesterase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001337222.1
NM_180131.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DUF3754 family protein, putative (DUF3754)
NP_850462.2
  • Protein of unknown function (DUF3754); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3754) (TAIR:AT3G19340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19273899..19277773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180131.2 → NP_850462.2  DUF3754 family protein, putative (DUF3754) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850462.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654F2L1, F4IK40
    Conserved Domains (1) summary
    pfam12576
    Location:475 → 605
    DUF3754; Protein of unknown function (DUF3754)

  2. NM_001337222.1 → NP_001323684.1  DUF3754 family protein, putative (DUF3754) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AXY3, A0A654F2L1
Nucleotide Protein
Heading Accession and Version

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