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CB5-C cytochrome B5 isoform C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819277, updated on 18-Sep-2024

Summary

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Official Symbol
CB5-C
Official Full Name
cytochrome B5 isoform C
Primary source
TAIR:AT2G46650
Locus tag
AT2G46650
See related
Araport:AT2G46650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS CYTOCHROME B5 ISOFORM C; ATCB5-C; B5 #1; CYTB5-C; cytochrome B5 isoform C; T3A4.3; T3A4_3
Summary
member of Cytochromes b5
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Genomic context

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See CB5-C in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (19151481..19152739)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix protein Neighboring gene NAD-dependent protein deacetylase HST1-like protein Neighboring gene cytochrome P450, family 78, subfamily A, polypeptide 6 Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. Bernard A, et al. Plant Cell, 2012 Jul. PMID 22773744, Free PMC Article
  2. Arabidopsis sucrose transporter SUT4 interacts with cytochrome b5-2 to regulate seed germination in response to sucrose and glucose. Li Y, et al. Mol Plant, 2012 Sep. PMID 22311778
  3. Intracellular sorting of the tail-anchored protein cytochrome b5 in plants: a comparative study using different isoforms from rabbit and Arabidopsis. Maggio C, et al. J Exp Bot, 2007. PMID 17322552
  4. Association of cytochrome b5 with ETR1 ethylene receptor signaling through RTE1 in Arabidopsis. Chang J, et al. Plant J, 2014 Feb. PMID 24635651, Free PMC Article
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_130230.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables heme binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
cytochrome B5 isoform C
NP_182188.1
  • cytochrome B5 isoform C (CB5-C); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 3777 Blast hits to 3746 proteins in 458 species: Archae - 2; Bacteria - 26; Metazoa - 909; Fungi - 1474; Plants - 787; Viruses - 3; Other Eukaryotes - 576 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19151481..19152739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130230.3 → NP_182188.1  cytochrome B5 isoform C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_182188.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q682C5, Q9ZNV4
    UniProtKB/TrEMBL
    A0A178VYU9, A0A5S9X7K3, A0A7G2EHH3
    Conserved Domains (1) summary
    pfam00173
    Location:6 → 78
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZNV4.1

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