U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNGC3 cyclic nucleotide gated channel 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819251, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
CNGC3
Official Full Name
cyclic nucleotide gated channel 3
Primary source
TAIR:AT2G46430
Locus tag
AT2G46430
See related
Araport:AT2G46430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCNGC3; CNGC3.C; cyclic nucleotide gated channel 3; F11C10.12
Summary
cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CNGC3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (19057999..19061492)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene helicase with zinc finger protein Neighboring gene cyclic nucleotide-gated channels Neighboring gene cyclic nucleotide-gated channel 12 Neighboring gene OxaA/YidC-like membrane insertion protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Arabidopsis thaliana cyclic nucleotide gated channel 3 forms a non-selective ion transporter involved in germination and cation transport. Gobert A, et al. J Exp Bot, 2006. PMID 16449377
  2. Genes encoding calmodulin-binding proteins in the Arabidopsis genome. Reddy VS, et al. J Biol Chem, 2002 Mar 22. PMID 11782485
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CNGC3 functions in the non-selective uptake of monovalent cations in Arabidopsis root tissue.
    Title: Arabidopsis thaliana cyclic nucleotide gated channel 3 forms a non-selective ion transporter involved in germination and cation transport.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NM_001125065.2
NM_130207.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calmodulin binding TAS
Traceable Author Statement
more info
 PubMed 
enables monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
cyclic nucleotide gated channel 3
NP_001118537.1
  • cyclic nucleotide gated channel 3 (CNGC3); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 10 (TAIR:AT1G01340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_566075.1
  • cyclic nucleotide gated channel 3 (CNGC3); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 10 (TAIR:AT1G01340.2); Has 3204 Blast hits to 3078 proteins in 223 species: Archae - 0; Bacteria - 24; Metazoa - 1501; Fungi - 4; Plants - 972; Viruses - 0; Other Eukaryotes - 703 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19057999..19061492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001125065.2 → NP_001118537.1  cyclic nucleotide gated channel 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118537.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SKD7, Q9XFS1, Q9ZPK1
    UniProtKB/TrEMBL
    A0A5S9X7Z4, A0A654FD01
    Conserved Domains (2) summary
    cd00038
    Location:477 → 606
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:83 → 406
    Ion_trans; Ion transport protein

  2. NM_130207.4 → NP_566075.1  cyclic nucleotide gated channel 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566075.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SKD7, Q9XFS1, Q9ZPK1
    UniProtKB/TrEMBL
    A0A5S9X7Z4, A0A654FD01
    Conserved Domains (2) summary
    cd00038
    Location:477 → 606
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:83 → 406
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SKD7.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools