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extra-large G-like protein, putative (DUF3133) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819246, updated on 18-Sep-2024

Summary

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Official Full Name
extra-large G-like protein, putative (DUF3133)
Primary source
TAIR:AT2G46380
Locus tag
AT2G46380
See related
Araport:AT2G46380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11C10.7
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (19039024..19042348)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Auxin-responsive GH3 family protein Neighboring gene uncharacterized protein Neighboring gene succinate dehydrogenase subunit Neighboring gene WRKY DNA-binding protein 46 Neighboring gene Homeodomain-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001337189.1
NM_130202.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of defense response to fungus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
extra-large G-like protein, putative (DUF3133)
NP_182161.3
  • Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19039024..19042348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130202.4 → NP_182161.3  extra-large G-like protein, putative (DUF3133) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_182161.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W1W9, A0A7G2EKF2, Q0WVG1
    Conserved Domains (1) summary
    pfam11331
    Location:382 → 426
    zinc_ribbon_12; Probable zinc-ribbon domain

  2. NM_001337189.1 → NP_001324868.1  extra-large G-like protein, putative (DUF3133) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B1E9, A0A7G2EKF2
Nucleotide Protein
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