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GBF3 G-box binding factor 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819235, updated on 18-Sep-2024

Summary

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Official Symbol
GBF3
Official Full Name
G-box binding factor 3
Primary source
TAIR:AT2G46270
Locus tag
AT2G46270
See related
Araport:AT2G46270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
BZIP TRANSCRIPTION FACTOR; G-box binding factor 3; T3F17.8
Summary
encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3###Os DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.
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Genomic context

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See GBF3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Sequence:
Chromosome: 2; NC_003071.7 (19000180..19003403)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene BTB/POZ/Kelch-associated protein Neighboring gene TGF-beta receptor interacting protein 1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GBF3 transcription factor imparts drought tolerance in Arabidopsis thaliana. Ramegowda V, et al. Sci Rep, 2017 Aug 22. PMID 28831141, Free PMC Article
  2. Transcription factor veracity: is GBF3 responsible for ABA-regulated expression of Arabidopsis Adh? Lu G, et al. Plant Cell, 1996 May. PMID 8672884, Free PMC Article
  3. Heterodimerization between light-regulated and ubiquitously expressed Arabidopsis GBF bZIP proteins. Schindler U, et al. EMBO J, 1992 Apr. PMID 1373374, Free PMC Article
  4. Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein. Menkens AE, et al. Proc Natl Acad Sci U S A, 1994 Mar 29. PMID 8146148, Free PMC Article
  5. Intracellular localization of GBF proteins and blue light-induced import of GBF2 fusion proteins into the nucleus of cultured Arabidopsis and soybean cells. Terzaghi WB, et al. Plant J, 1997 May. PMID 9193069

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

NM_001337182.1
NM_001337183.1
NM_130190.3
NM_180118.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
G-box binding factor 3
NP_182150.1
  • G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2267 Blast hits to 2266 proteins in 215 species: Archae - 0; Bacteria - 77; Metazoa - 736; Fungi - 40; Plants - 1305; Viruses - 8; Other Eukaryotes - 101 (source: NCBI BLink).
NP_850449.1
  • G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19000180..19003403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130190.3 → NP_182150.1  G-box binding factor 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_182150.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P42776
    UniProtKB/TrEMBL
    A0A178VVM5
    Conserved Domains (5) summary
    smart00338
    Location:257 → 320
    BRLZ; basic region leucin zipper
    cd14702
    Location:262 → 313
    bZIP_plant_GBF1; coiled coil [structural motif]
    pfam07777
    Location:1 → 96
    MFMR; G-box binding protein MFMR
    pfam16596
    Location:116 → 198
    MFMR_assoc; Disordered region downstream of MFMR
    cl19252
    Location:220 → 356
    MreC; rod shape-determining protein MreC

  2. NM_180118.2 → NP_850449.1  G-box binding factor 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850449.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VTX2, A0A5S9X7F5, F4II62
    Conserved Domains (3) summary
    smart00338
    Location:234 → 297
    BRLZ; basic region leucin zipper
    pfam07777
    Location:1 → 96
    MFMR; G-box binding protein MFMR
    pfam16596
    Location:129 → 197
    MFMR_assoc; Disordered region downstream of MFMR

  3. NM_001337182.1 → NP_001323457.1  G-box binding factor 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P42776
    UniProtKB/TrEMBL
    A0A178VVM5

  4. NM_001337183.1 → NP_001323456.1  G-box binding factor 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VTX2, A0A5S9X7F5, F4II62
    Conserved Domains (3) summary
    smart00338
    Location:234 → 297
    BRLZ; basic region leucin zipper
    pfam07777
    Location:1 → 96
    MFMR; G-box binding protein MFMR
    pfam16596
    Location:129 → 197
    MFMR_assoc; Disordered region downstream of MFMR
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42776.2

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