Bestrophin-like protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Bestrophin-like protein
Primary source: TAIR:AT2G45870
Locus tag: AT2G45870
See related: Araport:AT2G45870
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F4I18.15
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 3

Sequence:: Chromosome: 2; NC_003071.7 (18875736..18877679)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

MASC_STS14698 (e-PCR)
- UniSTS:258738

Homology

Orthologs from OrthoDB

NM_130150.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables chloride channel activity	IEA Inferred from Electronic Annotation more info
enables voltage-gated chloride channel activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of photosynthesis, light reaction	IDA Inferred from Direct Assay more info	PubMed
involved_in regulation of photosynthesis, light reaction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chloroplast stromal thylakoid	IDA Inferred from Direct Assay more info	PubMed
located_in plasma membrane	ISM Inferred from Sequence Model more info
located_in thylakoid membrane	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: Bestrophin-like protein

NP_182111.1

Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT3G61320.1); Has 1419 Blast hits to 1415 proteins in 515 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 123; Plants - 115; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

18875736..18877679

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001337156.1 → NP_001323656.1 Bestrophin-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8AXN9
NM_001337157.1 → NP_001323655.1 Bestrophin-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8AXP7, A0A654F3M4
NM_130150.3 → NP_182111.1 Bestrophin-like protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_182111.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O80832

UniProtKB/TrEMBL

A0A5S9X7B4, A0A654F3M4

Conserved Domains (1) summary

pfam01062
Location:93 → 370

Bestrophin; RFP-TM, chloride channel