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D-isomer specific 2-hydroxyacid dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819171, updated on 18-Sep-2024

Summary

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Official Full Name
D-isomer specific 2-hydroxyacid dehydrogenase family protein
Primary source
TAIR:AT2G45630
Locus tag
AT2G45630
See related
Araport:AT2G45630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17K2.16
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (18795926..18797263)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Nucleotidyltransferase family protein Neighboring gene miscRNA Neighboring gene SIN3 associated polypeptide P18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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NM_130125.1
NM_201964.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
colocalizes_with cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
D-isomer specific 2-hydroxyacid dehydrogenase family protein
NP_566049.1
  • D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 6623 Blast hits to 6621 proteins in 1548 species: Archae - 250; Bacteria - 4438; Metazoa - 370; Fungi - 171; Plants - 170; Viruses - 0; Other Eukaryotes - 1224 (source: NCBI BLink).
NP_973693.1
  • D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    18795926..18797263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130125.1 → NP_566049.1  D-isomer specific 2-hydroxyacid dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566049.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O64643, Q945K4
    Conserved Domains (1) summary
    cl21454
    Location:22 → 166
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. NM_201964.2 → NP_973693.1  D-isomer specific 2-hydroxyacid dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973693.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X797, A0A654FCS2, Q67XB5, Q67Y01
    Conserved Domains (1) summary
    cd12156
    Location:22 → 329
    HPPR; Hydroxy(phenyl)pyruvate Reductase, D-isomer-specific 2-hydroxyacid-related dehydrogenase
Nucleotide Protein
Heading Accession and Version

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