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Actin-like ATPase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818810, updated on 18-Sep-2024

Summary

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Official Full Name
Actin-like ATPase superfamily protein
Primary source
TAIR:AT2G42100
Locus tag
AT2G42100
See related
Araport:AT2G42100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6D20.1; T6D20_1
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (17560211..17561945)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene actin 9 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene DNA polymerase delta small subunit Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
  2. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
Actin-like ATPase superfamily protein
NP_181740.1
  • Actin-like ATPase superfamily protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 15158 Blast hits to 14731 proteins in 3038 species: Archae - 6; Bacteria - 6; Metazoa - 5717; Fungi - 5232; Plants - 1603; Viruses - 2; Other Eukaryotes - 2592 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17560211..17561945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129773.1 → NP_181740.1  Actin-like ATPase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181740.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P93737, Q8RYC2
    UniProtKB/TrEMBL
    A0A178VQF8
    Conserved Domains (1) summary
    cl17037
    Location:6 → 378
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RYC2.1

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