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OXS2 CCCH-type zinc finger protein with ARM repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818790, updated on 18-Sep-2024

Summary

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Official Symbol
OXS2
Official Full Name
CCCH-type zinc finger protein with ARM repeat domain-containing protein
Primary source
TAIR:AT2G41900
Locus tag
AT2G41900
See related
Araport:AT2G41900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
OXIDATIVE STRESS 2; T6D20.20; T6D20_20; tandem zinc finger protein 7; TZF7
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Genomic context

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See OXS2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (17490271..17493922)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A C-terminal fragment of Arabidopsis OXIDATIVE STRESS 2 can play a positive role in salt tolerance. Cai J, et al. Biochem Biophys Res Commun, 2021 Jun 4. PMID 33836344
  2. Stress tolerance to stress escape in plants: role of the OXS2 zinc-finger transcription factor family. Blanvillain R, et al. EMBO J, 2011 Aug 9. PMID 21829164, Free PMC Article
  3. OXS2 is Required for Salt Tolerance Mainly through Associating with Salt Inducible Genes, CA1 and Araport11, in Arabidopsis. Jing Y, et al. Sci Rep, 2019 Dec 30. PMID 31889067, Free PMC Article
  4. Nucleocytoplasmic OXIDATIVE STRESS 2 can relocate FLOWERING LOCUS T. Liang M, et al. Biochem Biophys Res Commun, 2019 Oct 1. PMID 31420167
  5. Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID. Mair A, et al. Elife, 2019 Sep 19. PMID 31535972, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_129754.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within response to salt IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
CCCH-type zinc finger protein with ARM repeat domain-containing protein
NP_565962.1
  • CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17490271..17493922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129754.4 → NP_565962.1  CCCH-type zinc finger protein with ARM repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565962.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P93755, Q94C18
    UniProtKB/TrEMBL
    A0A178VPY5
    Conserved Domains (4) summary
    smart00356
    Location:302 → 326
    ZnF_C3H1; zinc finger
    cd00204
    Location:48 → 182
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:49 → 159
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:74 → 123
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P93755.2

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