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MIZ1 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818764, updated on 18-Sep-2024

Summary

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Official Symbol
MIZ1
Official Full Name
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Primary source
TAIR:AT2G41660
Locus tag
AT2G41660
See related
Araport:AT2G41660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
mizu-kussei 1; T32G6.18; T32G6_18
Summary
Essential for hydrotropism in roots. Mutant roots are defective in hydrotropism, and have slightly reduced phototropism and modified wavy growth response. Has normal gravitropism and root elongation.
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Genomic context

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See MIZ1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (17367492..17369206)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 61 protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene NADPH-dependent thioredoxin reductase C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Recovery of root hydrotropism in miz1 mutant by eliminating root gravitropism. Li Y, et al. J Plant Physiol, 2024 Jan. PMID 38104389
  2. MIZ1-regulated hydrotropism functions in the growth and survival of Arabidopsis thaliana under natural conditions. Iwata S, et al. Ann Bot, 2013 Jul. PMID 23658369, Free PMC Article
  3. Overexpression of MIZU-KUSSEI1 enhances the root hydrotropic response by retaining cell viability under hydrostimulated conditions in Arabidopsis thaliana. Miyazawa Y, et al. Plant Cell Physiol, 2012 Nov. PMID 23012350
  4. MIZ1, an essential protein for root hydrotropism, is associated with the cytoplasmic face of the endoplasmic reticulum membrane in Arabidopsis root cells. Yamazaki T, et al. FEBS Lett, 2012 Feb 17. PMID 22285304
  5. A gene essential for hydrotropism in roots. Kobayashi A, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360591, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Recovery of root hydrotropism in miz1 mutant by eliminating root gravitropism.
    Title: Recovery of root hydrotropism in miz1 mutant by eliminating root gravitropism.
  2. MIZ1 acts downstream of PGM1 in regulating root hydrotropism.
    Title: MIZ1 acts downstream of PGM1 in regulating root hydrotropism.
  3. MIZU-KUSSEI1 (MIZ1) and GNOM/MIZ2 control not only positive hydrotropism but also phototropism in Arabidopsis roots.
    Title: MIZU-KUSSEI1 (MIZ1) and GNOM/MIZ2 control not only positive hydrotropism but also phototropism in Arabidopsis roots.
  4. the inhibition of ECA1 by MIZ1 changes the balance between cytosolic Ca(2+) influx and efflux and generates the cytosolic Ca(2+) signal required for water tracking.
    Title: MIZ1 regulates ECA1 to generate a slow, long-distance phloem-transmitted Ca(2+) signal essential for root water tracking in Arabidopsis.
  5. MIZ1-regulated hydrotropism functions in the growth and survival of Arabidopsis thaliana
    Title: MIZ1-regulated hydrotropism functions in the growth and survival of Arabidopsis thaliana under natural conditions.
  6. Overexpression of MIZ1 enhances tolerance to osmotic stress.
    Title: Overexpression of MIZU-KUSSEI1 enhances the root hydrotropic response by retaining cell viability under hydrostimulated conditions in Arabidopsis thaliana.
  7. MIZ1-GFP was detected at high levels in cortical cells and lateral root cap cells and accumulated in compartments in cortical cells.
    Title: MIZ1, an essential protein for root hydrotropism, is associated with the cytoplasmic face of the endoplasmic reticulum membrane in Arabidopsis root cells.
  8. MIZ1 plays a role in lateral root development by maintaining auxin levels and its function requires GNOM activity.
    Title: Hormonal regulation of lateral root development in Arabidopsis modulated by MIZ1 and requirement of GNOM activity for MIZ1 function.
  9. MIZ1 functions in the early phase of the hydrotropic response in Arabidopsis [MIZ1]
    Title: A gene essential for hydrotropism in roots.
Submit: New GeneRIF Correction

General gene information

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NM_129729.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within chloroplast organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within hydrotropism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in hydrotropism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endoplasmic reticulum membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
NP_565953.1
  • mizu-kussei 1 (MIZ1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 258 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17367492..17369206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129729.3 → NP_565953.1  MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565953.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22227, Q8LB38
    UniProtKB/TrEMBL
    A0A178VY97, A0A5S9X672
    Conserved Domains (1) summary
    TIGR01570
    Location:129 → 297
    A_thal_3588; uncharacterized plant-specific domain TIGR01570
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O22227.1

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