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SSL2 strictosidine synthase-like 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818728, updated on 18-Sep-2024

Summary

Official Symbol
SSL2
Official Full Name
strictosidine synthase-like 2
Primary source
TAIR:AT2G41290
Locus tag
AT2G41290
See related
Araport:AT2G41290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13H10.16; F13H10_16; strictosidine synthase-like 2
Summary
Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.
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Genomic context

See SSL2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (17210428..17213179, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene late embryogenesis abundant protein (M10) / LEA protein M10 Neighboring gene ncRNA Neighboring gene strictosidine synthase-like 1

General gene information

NM_129693.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region  

General protein information

Preferred Names
strictosidine synthase-like 2
NP_181661.1
  • strictosidine synthase-like 2 (SSL2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57030.1); Has 1076 Blast hits to 1064 proteins in 215 species: Archae - 3; Bacteria - 245; Metazoa - 227; Fungi - 12; Plants - 478; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17210428..17213179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129693.4 → NP_181661.1  strictosidine synthase-like 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181661.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81484, Q9SLG8
    UniProtKB/TrEMBL
    A0A178VTF7, A0A5S9X5Z9
    Conserved Domains (2) summary
    COG3386
    Location:30 → 293
    YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
    pfam03088
    Location:159 → 246
    Str_synth; Strictosidine synthase
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