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DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818699, updated on 18-Sep-2024

Summary

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Official Full Name
DHHC-type zinc finger family protein
Primary source
TAIR:AT2G40990
Locus tag
AT2G40990
See related
Araport:AT2G40990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T3K9.24; T3K9_24
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (17105097..17107030, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene Molecular chaperone Hsp40/DnaJ family protein Neighboring gene low-molecular-weight cysteine-rich 51

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DHHC-type zinc finger family protein
NP_181632.5
  • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56920.1); Has 5135 Blast hits to 5125 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2229; Fungi - 738; Plants - 856; Viruses - 0; Other Eukaryotes - 1312 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17105097..17107030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129664.6 → NP_181632.5  DHHC-type zinc finger family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181632.5

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IJ24, O80685
    UniProtKB/TrEMBL
    A0A178VV26, A0A5S9X5W3, A0A654F0R0
    Conserved Domains (1) summary
    pfam01529
    Location:160 → 282
    DHHC; DHHC palmitoyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80685.3

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