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PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818692, updated on 18-Sep-2024

Summary

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Official Full Name
PLAC8 family protein
Primary source
TAIR:AT2G40935
Locus tag
AT2G40935
See related
Araport:AT2G40935
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (17082745..17084376)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ubiquitin-specific protease 5 Neighboring gene ethylene response sensor 1 Neighboring gene Basic-leucine zipper (bZIP) transcription factor family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001125018.1
NM_001336877.1
NM_001336880.1
NM_001336881.1
NM_001336882.1
NM_129657.3
NM_180008.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
PLAC8 family protein
NP_001118490.1
  • PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001318397.1
  • PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 865 Blast hits to 864 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 94; Plants - 626; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
NP_850339.1
  • PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 562 Blast hits to 561 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 14; Plants - 529; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17082745..17084376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336878.1 → NP_001324509.1  PLAC8 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VWJ5
    Conserved Domains (1) summary
    TIGR01571
    Location:38 → 139
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  2. NM_001336879.1 → NP_001324510.1  PLAC8 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
    UniProtKB/TrEMBL
    A0A178VUB4, A0A178VW01, A0A5S9X5W6
    Conserved Domains (1) summary
    TIGR01571
    Location:45 → 163
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  3. NM_180008.2 → NP_850339.1  PLAC8 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850339.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VWJ5
    Conserved Domains (1) summary
    TIGR01571
    Location:38 → 139
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  4. NM_001336880.1 → NP_001324508.1  PLAC8 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
    UniProtKB/TrEMBL
    A0A178VUB4, A0A178VW01, A0A5S9X5W6
    Conserved Domains (1) summary
    TIGR01571
    Location:45 → 163
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  5. NM_001336877.1 → NP_001318397.1  PLAC8 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
    UniProtKB/TrEMBL
    A0A178VUB4, A0A178VW01, A0A5S9X5W6
    Conserved Domains (1) summary
    TIGR01571
    Location:45 → 163
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  6. NM_001125018.1 → NP_001118490.1  PLAC8 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118490.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8S8T8
    Conserved Domains (1) summary
    TIGR01571
    Location:45 → 152
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  7. NM_001336881.1 → NP_001324506.1  PLAC8 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VWJ5
    Conserved Domains (1) summary
    TIGR01571
    Location:38 → 139
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  8. NM_129657.3 → NP_565945.1  PLAC8 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565945.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
    UniProtKB/TrEMBL
    A0A178VUB4, A0A178VW01, A0A5S9X5W6
    Conserved Domains (1) summary
    TIGR01571
    Location:45 → 163
    A_thal_Cys_rich; uncharacterized Cys-rich domain

  9. NM_001336882.1 → NP_001324507.1  PLAC8 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
    UniProtKB/TrEMBL
    A0A178VUB4, A0A178VW01, A0A5S9X5W6
    Conserved Domains (1) summary
    TIGR01571
    Location:45 → 163
    A_thal_Cys_rich; uncharacterized Cys-rich domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8S8T8.1

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