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S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818560, updated on 18-Sep-2024

Summary

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Official Full Name
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Primary source
TAIR:AT2G39750
Locus tag
AT2G39750
See related
Araport:AT2G39750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5I7.5; T5I7_5
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (16578824..16582436, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RING-H2 finger C2A Neighboring gene LYR family of Fe/S cluster biogenesis protein Neighboring gene rubisco activase Neighboring gene Nucleotidyltransferase family protein Neighboring gene BTB/POZ/MATH-domains containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
  2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_129533.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in endosome HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in trans-Golgi network HDA PubMed 

General protein information

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Preferred Names
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NP_030521.1
  • S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16578824..16582436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129533.4 → NP_030521.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_030521.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22285
    UniProtKB/TrEMBL
    A0A654F0C2
    Conserved Domains (2) summary
    pfam03141
    Location:186 → 689
    Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
    cl17173
    Location:308 → 401
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O22285.1

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